Sched.com Conference Mobile Apps
Galaxy Community Conference 2016 (GCC16)
has ended
Create Your Own Event
Galaxy Community Conference 2016 (GCC16)
-
Saved To
My Schedule
Visit the main conference website:
http://galaxyproject.org/gcc2016
Schedule
Simple
Expanded
Grid
By Venue
Map
Speakers
Instructors
Sponsors
Moderators
Presenters
Attendees
Search
or browse by date + venue
A. Help
B. Networking & Sustenance
C. Hackathon
D.1 Training - Using
D.2 Training - General
D.3 Training - Deploy & Develop
D.x Training - All
E.1 Conference - Talks
E.2 Conference - Posters
E.3 Conference - Demos
E.4 Conference - Sponsors
E.5 Conference - Lightning
E.6 Birds-of-a-feather
E.x Conference - All
Popular
Sign up
or
log in
to bookmark your favorites and sync them to your phone or calendar.
menu
Menu
Log in
Sign up
Schedule
Speakers
Instructors
Sponsors
Moderators
Presenters
Attendees
Search
tune
Filter sessions
Simple
Expanded
Grid
By Venue
Map
Friday
, June 24
IMU East Lounge
6:00pm •
Conference desk open
Saturday
, June 25
LIB: Room E174, Herman B Wells Library
9:00am •
Hackathon Breakfast
LIB: Lobby, Herman B Wells Library
9:00am •
Conference desk open
7:00pm •
Training Office Hours
LIB: Scholars' Commons - Hazelbaker Lecture Hall, Herman B Wells Library
10:00am •
Data Hackathon
LIB: Scholars' Commons - IQ-Wall, Herman B Wells Library
10:00am •
Coding Hackathon
Sunday
, June 26
IMU Conference Lounge
8:00am •
Conference desk open
8:00am •
Training Breakfast
11:30am •
Training lunch (catered)
3:00pm •
Training Break
IMU Hoosier Room
8:30pm •
Training Office Hours
IMU Maple Room
9:00am •
Metagenomics with Galaxy
12:30pm •
Get your own Galaxy within minutes
3:30pm •
How to use Galaxy Ansible Playbooks
IMU Oak Room
9:00am •
Galaxy Architecture
12:30pm •
The Galaxy Database Schema
3:30pm •
RNA-seq analysis with Galaxy, using advanced workflows
7:30pm •
Galactically Speaking: Best Practices and Resources for Galaxy Training
IMU Persimmon Room
9:00am •
Introduction to Galaxy
12:30pm •
Human Variant Calling with Galaxy
3:30pm •
Introduction to Galaxy Interactive Environments
IMU Sassafras Room
9:00am •
Setting up a Galaxy instance as a service
12:30pm •
Beyond the Intro: Further adventures in using Galaxy
3:30pm •
BioinforMagic: Marrying Galaxy and Bioconductor
IMU Walnut Room
9:00am •
The Galaxy Docker Project
12:30pm •
Writing & Publishing Galaxy Tools
3:30pm •
ChIPseq analysis using deepTools and MACS
LIB: Room E174, Herman B Wells Library
9:00am •
Hackathon Breakfast
LIB: Scholars' Commons - Hazelbaker Lecture Hall, Herman B Wells Library
10:00am •
Data Hackathon
LIB: Scholars' Commons - IQ-Wall, Herman B Wells Library
10:00am •
Coding Hackathon
TBA
6:00pm •
Dinner (on your own)
Monday
, June 27
Cyberinfrastructure Building
6:45pm •
Conference desk open
7:00pm •
Opening Reception with Bus Schedule
IMU Conference Lounge
8:00am •
Training Breakfast
8:00am •
Conference desk open
3:00pm •
Training Break
IMU East Lounge
11:30am •
Training lunch (catered)
IMU Maple Room
9:00am •
Galaxy on the Cloud: build it
12:30pm •
Small Genome Annotation
3:30pm •
Visualization of Omics Datasets in Galaxy
IMU Oak Room
9:00am •
The Galaxy Docker Project
11:30am •
European Galaxy developer school Birds-of-a-feather
12:30pm •
Advanced Topics in Galaxy Tool Development
3:30pm •
Advanced Topics in Galaxy Interactive Environments
9:00pm •
GalaxyScientists Revival Birds-of-a-feather
IMU Persimmon Room
9:00am •
Small Genomes de novo Assembly and Scaffolding
12:30pm •
Beyond the Intro: Further adventures in using Galaxy
3:30pm •
RNA-seq analysis with Galaxy, using advanced workflows
IMU Sassafras Room
9:00am •
Introduction to Galaxy
12:30pm •
Contributing Code to the Galaxy Project
3:30pm •
RADseq Data Analysis Through STACKS on Galaxy
IMU Walnut Room
9:00am •
Dynamic prototyping of tools with Galaxy ProTo
11:30am •
Application containers for the win! Birds-of-a-feather
12:30pm •
Using Galaxy for proteomic and integrative multi-omic data analysis
3:30pm •
Scripting Galaxy using the API and BioBlend
IMU: Indiana Memorial Union
11:30am •
Birds-of-a-Feather Flocking
9:00pm •
Birds-of-a-Feather Flocking
Tuesday
, June 28
IMU Alumni Hall
8:00am •
Conference desk open
9:00am •
Session 1
9:00am •
Opening and Welcome
9:15am •
Keynote: Genomic variation. Impact of regulatory variation from RNA to protein
10:00am •
Proteogenomics in Galaxy: Identifying novel ‘constellations’ of proteoforms using transcriptomic and proteomic data.
10:20am •
An Interactive Tool for Reproducible Analysis of Affinity Proteomics Data
11:10am •
Coevolution of biological research and cyberinfrastructure from now till the end of Moore’s Law
11:10am •
Session 2
11:40am •
Sample Size Does Matter: Scaling Up Analysis in Galaxy with Metagenomics
12:00pm •
FROGS: Find Rapidly OTU with Galaxy Solution
12:20pm •
Ktoolu and idFusion - Galaxy Solutions for Plant Immunity and Pathogen Informatics
12:40pm •
Arts & Crafts
1:40pm •
Galaxy Community Update
1:40pm •
Session 3
2:15pm •
GSuite Tools: integrative genomic analyses across cells and epigenetic factors using Galaxy
2:35pm •
The Galaxy workflow for epigenetic profiling of progressing melanoma
2:55pm •
Infinite Galaxy!
4:25pm •
Session 4
4:25pm •
The LAPPS Grid and Galaxy
4:45pm •
Lightning Talks
4:48pm •
SeqResults - Simple comparisons of results across libraries
4:55pm •
Common Workflow Language v1.0 & How It Will Affect You
5:02pm •
A resource for metabolomics and transcriptomics analysis
5:09pm •
Science Gateways Community Institute
5:16pm •
Galaxy at the Pittsburgh Supercomputing Center
5:23pm •
65 millions of observers
IMU Oak Room
12:40pm •
Genome Annotation Birds-of-a-feather
IMU Solarium
8:00am •
Breakfast
10:40am •
Break
12:40pm •
Lunch (catered)
12:40pm •
GalaxyAdmins Birds-of-a-feather
3:10pm •
P09: A Galaxy Interactive Environment for exploring the Neo4J Graph Database
3:10pm •
P17: FROGS: Find Rapidly OTU with Galaxy Solution
3:10pm •
D05: Apollo: Manual Annotation in Galaxy
3:10pm •
P01: ELIXIR: a distributed infrastructure for life-science information
3:10pm •
D09: CosmicNotes - Write your daily lab notebook entries within Galaxy.
3:10pm •
P15: MYcrobiota: An open-source, user-friendly Galaxy application for microbiota determination and dynamic reporting from 16S sequences
3:10pm •
Demo Session 1: Odd numbers
3:10pm •
P29: Trinity CTAT: A Community Resource for De Novo andReference-based RNA-Seq Analysis
3:10pm •
P23: A Multi-omics Visualization Platform (MVP) Plug-in for Galaxy-based Applications
3:10pm •
P27: GeneSeqToFamily: the Ensembl GeneTree pipeline as a Galaxy workflow
3:10pm •
Poster Session 1: Odd numbers
3:10pm •
P07: Hardwood Genomics Database (HGD): a web portal and database resource for hardwood tree genomic and genetic research
3:10pm •
P19: Interaction Analysis of Vancomycin-Resistome from RNA-seq Data using Galaxy and Functional Examination of sRNA241 in S. aureus
3:10pm •
P03: Using Galaxy with Jetstream
3:10pm •
P05: Advantages and Challenges of Using Galaxy CloudMan within an Integrated Data Analysis and Visualization Platform
3:10pm •
D07: Galaxy as a Platform for Genome Annotation and Scalable Big Data Training
3:10pm •
D03: Advantages and Challenges of Using Galaxy CloudMan within an Integrated Data Analysis and Visualization Platform
3:10pm •
D01: Demonstrating Galaxy with Jetstream
3:10pm •
P11: Apollo: Collaborative Manual Annotation for Genomic Sequencing Projects
3:10pm •
P21: The TRUElncRNA workflow: A Galaxy based workflow for identification of novel and known high confidence long non-coding RNAs.
3:10pm •
P13: Galaxy as a Platform for Genome Annotation and Scalable Big Data Training
3:10pm •
Sponsor Exhibition
3:10pm •
P25: Recent developments and new directions for the Galaxy-P project
IMU: Indiana Memorial Union
12:40pm •
Birds-of-a-Feather Flocking
7:00pm •
Birds-of-a-Feather Flocking
TBA
5:30pm •
Dinner & Socializing (on your own)
Wednesday
, June 29
IMU Alumni Hall
8:00am •
Conference desk open
9:00am •
Session 5
9:00am •
Welcome Day 2
9:10am •
Enhancements to Galaxy for delivering on NIH Commons
9:30am •
Moving data from the warehouse to the workbench: a bridge to Galaxy from the Tripal community genome database software platform
9:50am •
Apollo: Collaborative Manual Annotation for Genomic Sequencing Projects
10:10am •
Accurate and Complete Gene Construction with EvidentialGene Pipeline
11:00am •
Galaxy security practices in an age of clinical data for point of care services
11:00am •
Session 6
11:20am •
Increasing Beer Time: Decreasing the Galaxy System Administration Burden
11:40am •
The Intergalactic Utilities Commission - driving Galaxy tool development
12:00pm •
Planemo – A Scientific Workflow SDK
12:20pm •
CloudLaunch as a multi-cloud, multi-application launch platform
12:40pm •
Arts & Crafts
1:40pm •
Session 7
1:40pm •
FlowGalaxy: Developing a workflow for Flow Cytometry Analysis in Galaxy
2:00pm •
Outbreak surveillance and investigation using IRIDA and SNVPhyl
2:20pm •
Metavisitor, a suite of Galaxy tools and workflows for detection or discovery of viruses in NGS datasets
2:40pm •
Chemflow, chemometrics using Galaxy
4:30pm •
Session 8
4:30pm •
Lightning Talks
4:33pm •
Annotation integration of M. tuberculosis data using the Neo4j graph database
4:40pm •
Galaxy & Docker & Users
4:47pm •
Dynamic Tool Destination - A Universal Rule Based Job to Destination Mapper
4:54pm •
Applied Bioinformatics - Interdisciplinary Curriculum Built on Open Source Technology
5:01pm •
Embracing Complexity and Diversity: Metaproteomics Within The Galaxy Framework.
5:08pm •
Distributing Galaxy Data Through CVMFS
5:15pm •
A Generic Circos Galaxy Tool
5:22pm •
Integrating workflow support for GenomeSpace into Galaxy
5:29pm •
Tool Framework Developments
5:36pm •
The Monarch Initiative and Phenopackets Wrapped
5:43pm •
Datathon Lightning!
5:50pm •
Conference Closing
IMU Solarium
8:00am •
Breakfast
10:30am •
Break
12:40pm •
Bioinformatics education at undergraduate level
12:40pm •
Lunch (catered)
3:15pm •
P14: Outbreak surveillance and investigation using IRIDA and SNVPhyl
3:15pm •
P02: Science Gateways Community Institute
3:15pm •
Sponsor Exhibition
3:15pm •
P24: Sequence Data Analysis and the Clinical Genomics Database
3:15pm •
D04: Managing Galaxy services with Ansible and GalaxyKickstart
3:15pm •
P26: National Resource for Translational and Developmental Proteomics Galaxy Portal
3:15pm •
D10: PMR (Plant/Eukaryotic and Microbial Systems Resource) and its Science app using Araport
3:15pm •
P08: COMBAT TB Explorer, a TB data exploration workbench
3:15pm •
D08: MiModD - a streamlined tool suite for genetic variant identification and mapping with Galaxy
3:15pm •
P04: Dynamic Tool Destination – A universal rule based job to destination mapper
3:15pm •
D06: BLAST with JBrowse and Galaxy
3:15pm •
Demo Session 2: Even numbers
3:15pm •
P22: SeqResults for development of RNA-seq reagents
3:15pm •
D02: The Genomics Virtual Lab - A turnkey Galaxy platform for the cloud
3:15pm •
P12: A Galaxy Workflow for the Generation of Synthetic FASTQ Samples
3:15pm •
P18: Examining Genomic Variants in a Polymorphic Species
3:15pm •
Poster Session 2: Even numbers
3:15pm •
P10: A resource for metabolomics and transcriptomics analysis
3:15pm •
P20: Analysis of small non-coding RNAs of poorly annotated species in Galaxy with the help of ortholog information of well annotated species
3:15pm •
P16: Comparison of Metagenomics Taxonomy Assignment Methods: Popular Softwares and NCBI Mega-Blast
3:15pm •
P28: Aligning with Architecture for NGS
IMU Tudor Room
7:00pm •
Conference Dinner
IMU: Indiana Memorial Union
12:40pm •
Birds-of-a-Feather Flocking
Timezone
Galaxy Community Conference 2016 (GCC16)
America/New York
Filter By Date
Galaxy Community Conference 2016 (GCC16)
Jun 24
-
29, 2016
Friday
, June 24
Saturday
, June 25
Sunday
, June 26
Monday
, June 27
Tuesday
, June 28
Wednesday
, June 29
Filter By Venue
Bloomington, IN, United States
Sort schedule by Venue
Cyberinfrastructure Building
IMU Alumni Hall
IMU Conference Lounge
IMU East Lounge
IMU Hoosier Room
IMU Maple Room
IMU Oak Room
IMU Persimmon Room
IMU Sassafras Room
IMU Solarium
IMU Tudor Room
IMU Walnut Room
IMU: Indiana Memorial Union
LIB: Room E174, Herman B Wells Library
LIB: Lobby, Herman B Wells Library
LIB: Scholars' Commons - Hazelbaker Lecture Hall, Herman B Wells Library
LIB: Scholars' Commons - IQ-Wall, Herman B Wells Library
TBA
Filter By Type
A. Help
B. Networking & Sustenance
C. Hackathon
D.1 Training - Using
D.2 Training - General
D.3 Training - Deploy & Develop
D.x Training - All
E.1 Conference - Talks
E.2 Conference - Posters
E.3 Conference - Demos
E.4 Conference - Sponsors
E.5 Conference - Lightning
E.6 Birds-of-a-feather
E.x Conference - All
Popular
Recently Active Attendees
C
CWFrank
UITS Research Technologies
L
LesterQD
Y
YLBarry
I
IDClark
X
XJKermit
H
HZDarrell
H
HermanKY
More →
Filter sessions
Apply filters to sessions.
close
Dates
Friday
, June 24
Saturday
, June 25
Sunday
, June 26
Monday
, June 27
Tuesday
, June 28
Wednesday
, June 29
Venue
Cyberinfrastructure Building
IMU Alumni Hall
IMU Conference Lounge
IMU East Lounge
IMU Hoosier Room
IMU Maple Room
IMU Oak Room
IMU Persimmon Room
IMU Sassafras Room
IMU Solarium
IMU Tudor Room
IMU Walnut Room
IMU: Indiana Memorial Union
LIB: Room E174, Herman B Wells Library
LIB: Lobby, Herman B Wells Library
LIB: Scholars' Commons - Hazelbaker Lecture Hall, Herman B Wells Library
LIB: Scholars' Commons - IQ-Wall, Herman B Wells Library
TBA
Session Type
A. Help
B. Networking & Sustenance
C. Hackathon
D.1 Training - Using
D.2 Training - General
D.3 Training - Deploy & Develop
D.x Training - All
E.1 Conference - Talks
E.2 Conference - Posters
E.3 Conference - Demos
E.4 Conference - Sponsors
E.5 Conference - Lightning
E.6 Birds-of-a-feather
E.x Conference - All
Other Filters
Popular
