Galaxy Community Conference 2016 (GCC16) has ended

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Galaxy Community Conference 2016 (GCC16)

Visit the main conference website: http://galaxyproject.org/gcc2016

Rémi Marenco

George Washington University
Software engineer
Ashburn, VA

https://wiki.galaxyproject.org/RemiMarenco

9:00am EDT

Conference desk open LIB: Lobby, Herman B Wells Library

10:00am EDT

Coding Hackathon LIB: Scholars' Commons - IQ-Wall, Herman B Wells Library

10:00am EDT

Coding Hackathon LIB: Scholars' Commons - IQ-Wall, Herman B Wells Library

12:30pm EDT

Writing & Publishing Galaxy Tools IMU Walnut RoomMarius van den Beek • Dave Bouvier • John Chilton • Bjorn Gruning • Nicola Soranzo

3:30pm EDT

How to use Galaxy Ansible Playbooks IMU Maple RoomEnis Afgan • Nate Coraor

9:00am EDT

The Galaxy Docker Project IMU Oak RoomMarius van den Beek • Bjorn Gruning

11:30am EDT

Training lunch (catered) IMU East Lounge Application containers for the win! Birds-of-a-feather IMU Walnut RoomOleksandr Moskalenko

12:30pm EDT

Advanced Topics in Galaxy Tool Development IMU Oak RoomMarius van den Beek • Dave Bouvier • John Chilton • Bjorn Gruning • Nicola Soranzo

3:00pm EDT

Training Break IMU Conference Lounge

3:30pm EDT

Scripting Galaxy using the API and BioBlend IMU Walnut RoomDannon Baker • Nicola Soranzo

7:00pm EDT

Opening Reception with Bus Schedule Cyberinfrastructure Building

8:00am EDT

Breakfast IMU Solarium

9:00am EDT

Opening and Welcome IMU Alumni HallRobert Ping

9:15am EDT

Keynote: Genomic variation. Impact of regulatory variation from RNA to protein IMU Alumni HallYoav Gilad

10:00am EDT

Proteogenomics in Galaxy: Identifying novel ‘constellations’ of proteoforms using transcriptomic and proteomic data. IMU Alumni HallPratik Jagtap

10:20am EDT

An Interactive Tool for Reproducible Analysis of Affinity Proteomics Data IMU Alumni HallPaul A. Stewart

10:40am EDT

Break IMU Solarium

11:10am EDT

Coevolution of biological research and cyberinfrastructure from now till the end of Moore’s Law IMU Alumni HallCraig A. Stewart

11:40am EDT

Sample Size Does Matter: Scaling Up Analysis in Galaxy with Metagenomics IMU Alumni HallDaniel Blankenberg

12:00pm EDT

FROGS: Find Rapidly OTU with Galaxy Solution IMU Alumni HallYvan Le Bras

12:20pm EDT

Ktoolu and idFusion - Galaxy Solutions for Plant Immunity and Pathogen Informatics IMU Alumni HallChristian Schudoma

12:40pm EDT

GalaxyAdmins Birds-of-a-feather IMU SolariumDave Clements • Hans-Rudolf Hotz Genome Annotation Birds-of-a-feather IMU Oak RoomNathan Dunn • Suzanna Lewis

1:40pm EDT

Galaxy Community Update IMU Alumni HallJeremy Goecks • Anton Nekrutenko • James Taylor

2:15pm EDT

GSuite Tools: integrative genomic analyses across cells and epigenetic factors using Galaxy IMU Alumni HallBoris Simovski

2:35pm EDT

The Galaxy workflow for epigenetic profiling of progressing melanoma IMU Alumni HallKatarzyna Murat • Krzysztof Poterlowicz

2:55pm EDT

Infinite Galaxy! IMU Alumni HallBrian Finley

3:10pm EDT

P13: Galaxy as a Platform for Genome Annotation and Scalable Big Data Training IMU SolariumRémi Marenco D07: Galaxy as a Platform for Genome Annotation and Scalable Big Data Training IMU SolariumRémi Marenco

4:25pm EDT

The LAPPS Grid and Galaxy IMU Alumni HallKeith Suderman

4:45pm EDT

Lightning Talks IMU Alumni Hall

4:55pm EDT

Common Workflow Language v1.0 & How It Will Affect You IMU Alumni HallMichael R. Crusoe

5:02pm EDT

A resource for metabolomics and transcriptomics analysis IMU Alumni HallManhoi Hur

5:09pm EDT

Science Gateways Community Institute IMU Alumni HallNancy Wilkins-Diehr

5:16pm EDT

Galaxy at the Pittsburgh Supercomputing Center IMU Alumni HallAlex Ropelewski

5:30pm EDT

Dinner & Socializing (on your own) TBA

8:00am EDT

Breakfast IMU Solarium

9:00am EDT

Welcome Day 2 IMU Alumni Hall

9:10am EDT

Enhancements to Galaxy for delivering on NIH Commons IMU Alumni HallRavi K. Madduri

9:30am EDT

Moving data from the warehouse to the workbench: a bridge to Galaxy from the Tripal community genome database software platform IMU Alumni HallMargaret Staton

9:50am EDT

Apollo: Collaborative Manual Annotation for Genomic Sequencing Projects IMU Alumni HallNathan Dunn

10:10am EDT

Accurate and Complete Gene Construction with EvidentialGene Pipeline IMU Alumni HallDon Gilbert

11:00am EDT

Galaxy security practices in an age of clinical data for point of care services IMU Alumni HallCarrie Ganote

11:20am EDT

Increasing Beer Time: Decreasing the Galaxy System Administration Burden IMU Alumni HallNate Coraor

11:40am EDT

The Intergalactic Utilities Commission - driving Galaxy tool development IMU Alumni HallBjorn Gruning

12:00pm EDT

Planemo – A Scientific Workflow SDK IMU Alumni HallJohn Chilton

12:20pm EDT

CloudLaunch as a multi-cloud, multi-application launch platform IMU Alumni HallEnis Afgan

12:40pm EDT

Lunch (catered) IMU Solarium

1:40pm EDT

FlowGalaxy: Developing a workflow for Flow Cytometry Analysis in Galaxy IMU Alumni HallCristel G. Thomas

2:00pm EDT

Outbreak surveillance and investigation using IRIDA and SNVPhyl IMU Alumni HallAaron Petkau

2:20pm EDT

Metavisitor, a suite of Galaxy tools and workflows for detection or discovery of viruses in NGS datasets IMU Alumni HallChristophe Antoniewski • Marius van den Beek

2:40pm EDT

Chemflow, chemometrics using Galaxy IMU Alumni HallVirginie Rossard

4:30pm EDT

Lightning Talks IMU Alumni Hall

5:50pm EDT

Conference Closing IMU Alumni HallMarilyne

7:00pm EDT

Conference Dinner IMU Tudor Room