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Galaxy Community Conference 2016 (GCC16)

Visit the main conference website: http://galaxyproject.org/gcc2016

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James Abbott

Imperial College London
Lead Bioinformatician, Bioinformatics Data Science Group

9:00am

Galaxy Architecture IMU Oak RoomJohn Chilton • Nate Coraor

12:30pm

Writing & Publishing Galaxy Tools IMU Walnut RoomMarius van den Beek • Dave Bouvier • John Chilton • Björn Grüning • Nicola Soranzo

3:30pm

BioinforMagic: Marrying Galaxy and Bioconductor IMU Sassafras RoomMallory Freeberg • Nitesh Turaga

9:00am

The Galaxy Docker Project IMU Oak RoomMarius van den Beek • Björn Grüning

12:30pm

Advanced Topics in Galaxy Tool Development IMU Oak RoomMarius van den Beek • Dave Bouvier • John Chilton • Björn Grüning • Nicola Soranzo

3:30pm

Visualization of Omics Datasets in Galaxy IMU Maple RoomJeremy Goecks • Aysam Guerler

9:15am

Keynote: Genomic variation. Impact of regulatory variation from RNA to protein IMU Alumni HallYoav Gilad

10:00am

Proteogenomics in Galaxy: Identifying novel ‘constellations’ of proteoforms using transcriptomic and proteomic data. IMU Alumni HallPratik Jagtap

10:20am

An Interactive Tool for Reproducible Analysis of Affinity Proteomics Data IMU Alumni HallPaul A. Stewart

11:10am

Coevolution of biological research and cyberinfrastructure from now till the end of Moore’s Law IMU Alumni HallCraig Stewart

11:40am

Sample Size Does Matter: Scaling Up Analysis in Galaxy with Metagenomics IMU Alumni HallDaniel Blankenberg

12:00pm

FROGS: Find Rapidly OTU with Galaxy Solution IMU Alumni HallYvan Le Bras

12:20pm

Ktoolu and idFusion - Galaxy Solutions for Plant Immunity and Pathogen Informatics IMU Alumni HallChristian Schudoma

12:40pm

GalaxyAdmins Birds-of-a-feather IMU SolariumDave Clements • Hans-Rudolf Hotz

1:40pm

Galaxy Community Update IMU Alumni HallJeremy Goecks • Anton Nekrutenko • James Taylor

2:15pm

GSuite Tools: integrative genomic analyses across cells and epigenetic factors using Galaxy IMU Alumni HallBoris Simovski

2:35pm

The Galaxy workflow for epigenetic profiling of progressing melanoma IMU Alumni HallKatarzyna Murat • Krzysztof Poterlowicz

2:55pm

Infinite Galaxy! IMU Alumni HallBrian Finley

4:25pm

The LAPPS Grid and Galaxy IMU Alumni HallKeith Suderman

4:45pm

Lightning Talks IMU Alumni Hall

9:00am

Welcome Day 2 IMU Alumni Hall

9:10am

Enhancements to Galaxy for delivering on NIH Commons IMU Alumni HallRavi K. Madduri

9:30am

Moving data from the warehouse to the workbench: a bridge to Galaxy from the Tripal community genome database software platform IMU Alumni HallMargaret Staton

9:50am

Apollo: Collaborative Manual Annotation for Genomic Sequencing Projects IMU Alumni HallNathan Dunn

10:10am

Accurate and Complete Gene Construction with EvidentialGene Pipeline IMU Alumni HallDon Gilbert

10:30am

Break IMU Solarium

11:00am

Galaxy security practices in an age of clinical data for point of care services IMU Alumni HallCarrie Ganote

11:20am

Increasing Beer Time: Decreasing the Galaxy System Administration Burden IMU Alumni HallNate Coraor

11:40am

The Intergalactic Utilities Commission - driving Galaxy tool development IMU Alumni HallBjörn Grüning

12:00pm

Planemo – A Scientific Workflow SDK IMU Alumni HallJohn Chilton

12:20pm

CloudLaunch as a multi-cloud, multi-application launch platform IMU Alumni HallEnis Afgan

1:40pm

FlowGalaxy: Developing a workflow for Flow Cytometry Analysis in Galaxy IMU Alumni HallCristel G. Thomas

2:00pm

Outbreak surveillance and investigation using IRIDA and SNVPhyl IMU Alumni HallAaron Petkau

2:20pm

Metavisitor, a suite of Galaxy tools and workflows for detection or discovery of viruses in NGS datasets IMU Alumni HallChristophe Antoniewski • Marius van den Beek

2:40pm

Chemflow, chemometrics using Galaxy IMU Alumni HallVirginie Rossard

4:30pm

Lightning Talks IMU Alumni Hall

4:33pm

Annotation integration of M. tuberculosis data using the Neo4j graph database IMU Alumni HallPeter van Heusden

7:00pm

Conference Dinner IMU Tudor Room