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Galaxy Community Conference 2016 (GCC16)
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A. Help
B. Networking & Sustenance
C. Hackathon
D.1 Training - Using
D.2 Training - General
D.3 Training - Deploy & Develop
D.x Training - All
E.1 Conference - Talks
E.2 Conference - Posters
E.3 Conference - Demos
E.4 Conference - Sponsors
E.5 Conference - Lightning
E.6 Birds-of-a-feather
E.x Conference - All
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James Abbott
Imperial College London
Lead Bioinformatician, Bioinformatics Data Science Group
Sunday
, June 26
9:00am EDT
Galaxy Architecture
IMU Oak Room
John Chilton • Nate Coraor
12:30pm EDT
Writing & Publishing Galaxy Tools
IMU Walnut Room
Marius van den Beek • Dave Bouvier • John Chilton • Bjorn Gruning • Nicola Soranzo
3:30pm EDT
BioinforMagic: Marrying Galaxy and Bioconductor
IMU Sassafras Room
Mallory Freeberg • Nitesh Turaga
Monday
, June 27
9:00am EDT
The Galaxy Docker Project
IMU Oak Room
Marius van den Beek • Bjorn Gruning
12:30pm EDT
Advanced Topics in Galaxy Tool Development
IMU Oak Room
Marius van den Beek • Dave Bouvier • John Chilton • Bjorn Gruning • Nicola Soranzo
3:30pm EDT
Visualization of Omics Datasets in Galaxy
IMU Maple Room
Jeremy Goecks • Aysam Guerler
Tuesday
, June 28
9:15am EDT
Keynote: Genomic variation. Impact of regulatory variation from RNA to protein
IMU Alumni Hall
Yoav Gilad
10:00am EDT
Proteogenomics in Galaxy: Identifying novel ‘constellations’ of proteoforms using transcriptomic and proteomic data.
IMU Alumni Hall
Pratik Jagtap
10:20am EDT
An Interactive Tool for Reproducible Analysis of Affinity Proteomics Data
IMU Alumni Hall
Paul A. Stewart
11:10am EDT
Coevolution of biological research and cyberinfrastructure from now till the end of Moore’s Law
IMU Alumni Hall
Craig A. Stewart
11:40am EDT
Sample Size Does Matter: Scaling Up Analysis in Galaxy with Metagenomics
IMU Alumni Hall
Daniel Blankenberg
12:00pm EDT
FROGS: Find Rapidly OTU with Galaxy Solution
IMU Alumni Hall
Yvan Le Bras
12:20pm EDT
Ktoolu and idFusion - Galaxy Solutions for Plant Immunity and Pathogen Informatics
IMU Alumni Hall
Christian Schudoma
12:40pm EDT
GalaxyAdmins Birds-of-a-feather
IMU Solarium
Dave Clements • Hans-Rudolf Hotz
1:40pm EDT
Galaxy Community Update
IMU Alumni Hall
Jeremy Goecks • Anton Nekrutenko • James Taylor
2:15pm EDT
GSuite Tools: integrative genomic analyses across cells and epigenetic factors using Galaxy
IMU Alumni Hall
Boris Simovski
2:35pm EDT
The Galaxy workflow for epigenetic profiling of progressing melanoma
IMU Alumni Hall
Katarzyna Murat • Krzysztof Poterlowicz
2:55pm EDT
Infinite Galaxy!
IMU Alumni Hall
Brian Finley
4:25pm EDT
The LAPPS Grid and Galaxy
IMU Alumni Hall
Keith Suderman
4:45pm EDT
Lightning Talks
IMU Alumni Hall
Wednesday
, June 29
9:00am EDT
Welcome Day 2
IMU Alumni Hall
9:10am EDT
Enhancements to Galaxy for delivering on NIH Commons
IMU Alumni Hall
Ravi K. Madduri
9:30am EDT
Moving data from the warehouse to the workbench: a bridge to Galaxy from the Tripal community genome database software platform
IMU Alumni Hall
Margaret Staton
9:50am EDT
Apollo: Collaborative Manual Annotation for Genomic Sequencing Projects
IMU Alumni Hall
Nathan Dunn
10:10am EDT
Accurate and Complete Gene Construction with EvidentialGene Pipeline
IMU Alumni Hall
Don Gilbert
10:30am EDT
Break
IMU Solarium
11:00am EDT
Galaxy security practices in an age of clinical data for point of care services
IMU Alumni Hall
Carrie Ganote
11:20am EDT
Increasing Beer Time: Decreasing the Galaxy System Administration Burden
IMU Alumni Hall
Nate Coraor
11:40am EDT
The Intergalactic Utilities Commission - driving Galaxy tool development
IMU Alumni Hall
Bjorn Gruning
12:00pm EDT
Planemo – A Scientific Workflow SDK
IMU Alumni Hall
John Chilton
12:20pm EDT
CloudLaunch as a multi-cloud, multi-application launch platform
IMU Alumni Hall
Enis Afgan
1:40pm EDT
FlowGalaxy: Developing a workflow for Flow Cytometry Analysis in Galaxy
IMU Alumni Hall
Cristel G. Thomas
2:00pm EDT
Outbreak surveillance and investigation using IRIDA and SNVPhyl
IMU Alumni Hall
Aaron Petkau
2:20pm EDT
Metavisitor, a suite of Galaxy tools and workflows for detection or discovery of viruses in NGS datasets
IMU Alumni Hall
Christophe Antoniewski • Marius van den Beek
2:40pm EDT
Chemflow, chemometrics using Galaxy
IMU Alumni Hall
Virginie Rossard
4:30pm EDT
Lightning Talks
IMU Alumni Hall
4:33pm EDT
Annotation integration of M. tuberculosis data using the Neo4j graph database
IMU Alumni Hall
Peter van Heusden
7:00pm EDT
Conference Dinner
IMU Tudor Room
Timezone
Galaxy Community Conference 2016 (GCC16)
America/New York
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Galaxy Community Conference 2016 (GCC16)
Jun 24
-
29, 2016
Friday
, June 24
Saturday
, June 25
Sunday
, June 26
Monday
, June 27
Tuesday
, June 28
Wednesday
, June 29
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Bloomington, IN, United States
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IMU: Indiana Memorial Union
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