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Wednesday, June 29 • 5:36pm - 5:43pm
The Monarch Initiative and Phenopackets Wrapped

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Slides    doi: 10.7490/f1000research.1112757.1

Monarch (https://monarchinitiative.org) integrates a variety of genomic, phenotypic, and disease data by leveraging ontologies to create relationships across multiple organisms.   
We have (quickly using planemo!) created a galaxy tool to wrap the web services exposed by monarch, including the phenopacket implementation.   

Please let us know how we can improve on this first cut. Looking forward to getting some feedback from you


Moderators
SL

Suzanna Lewis

Lawrence Berkeley National Laboratory

Presenters
avatar for Nathan Dunn

Nathan Dunn

Lead Software Engineer, Lawrence Berkeley National Laboratory
I primarily work on the Apollo project, a web-based genome editor used for real-time collaborative manual curation, AKA Google Docs for genome editing. Apollo is built using JBrowse as our genomic viewer. http://genomearchitect.org https://github.com/GMOD/Apollo We use Grails + GWT + Angular (in addition to the JBrowse stack). I'm a scientific programmer having worked in a variety of domains including biology, psychology, automated speech... Read More →


Attendees (1)