Loading…
This event has ended. View the official site or create your own event → Check it out
This event has ended. Create your own
Visit the main conference website:  http://galaxyproject.org/gcc2016
View analytic
Wednesday, June 29 • 3:15pm - 4:30pm
P10: A resource for metabolomics and transcriptomics analysis

Sign up or log in to save this to your schedule and see who's attending!

Poster    doi: 10.7490/f1000research.1112741.1

Authors

Manhoi Hur, Iowa State University
Jason R. Miller, J Craig Venter Institute
Christopher D. Town (J Craig Venter Institute
Erik Ferlanti, J Craig Venter Institute
Irina Belyaeva, J Craig Venter Institute
Eve Syrkin Wurtele, Iowa State University

Abstract

PMR (Plant/Eukaryotic and Microbial Systems Resource) and its database are a community resource for deposition and analysis of metabolomics data and related transcriptomics data. PMR currently houses terabytes of data and metadata from over 25 species of eukaryotes, and provides a unique resource for computational modeling and hypothesis development. PMR’s web APIs enables PMR data and analytic functions to integrate with other community resources. In this talk, we introduce the PMR database and illustrate its analytic tools. We present a proof-of-concept for the utility of the API as a research science app using Araport to provide Arabidopsis metabolomics data and its functionality to diverse users.

Presenters


Attendees (4)