Name: Metagenomics with Galaxy
Start: 2016-06-26T09:00:00-0400
End: 2016-06-26T11:30:00-0400

Visit the main conference website: http://galaxyproject.org/gcc2016

Metagenomics with Galaxy

➔ Video

Tools and workflows for the analysis and visualisation of metagenomics data sets.

Software & Downloads:

Ability to unzip files: can unzip on command-line; or use a GUI, like 7Zip (http://www.7-zip.org/) or your OS built-inAbility to upload files via FTP: can use ftp command-line, or can use GUI like Cyberduck (https://cyberduck.io/) or another (https://en.wikipedia.org/wiki/Comparison_of_FTP_client_software)
We will be using a Galaxy Instance available at: http://gcc2016.dblankenberg.org/
It would be helpful as well if you download this file in advance: http://gcc2016.dblankenberg.org/static/example/MiSeqSOPData.zip alternate link: http://www.mothur.org/w/images/d/d6/MiSeqSOPData.zip
Slides are available here: http://dblankenberg.org/gcc2016/training/metagenomics/blankenberg_gcc_2016_training_metagenomics.pdf

Prerequisites:

A general knowledge of Galaxy (for example, you should be familiar with the material in Galaxy 101 or have attended Introduction to Galaxy).

A wi-fi enabled laptop with a modern web browser. Google Chrome, Firefox and Safari will work best.

Instructors

Daniel Blankenberg

Assistant Professor, Genomic Medicine Institute, Cleveland Clinic Lerner Research Institute

Sunday June 26, 2016 9:00am - 11:30am EDT
IMU Maple Room

D.1 Training - Using D.x Training - All

Galaxy Community Conference 2016 (GCC16)

Daniel Blankenberg

Attendees (9)

Galaxy Community Conference 2016 (GCC16)

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Daniel Blankenberg

Attendees (9)