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Galaxy Community Conference 2016 (GCC16)
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Galaxy Community Conference 2016 (GCC16)
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http://galaxyproject.org/gcc2016
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Sunday
, June 26 • 9:00am - 11:30am
Metagenomics with Galaxy
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Video
Tools and workflows for the analysis and visualisation of metagenomics data sets.
Software & Downloads:
Ability to unzip files: can unzip on command-line; or use a GUI, like 7Zip (
http://www.7-zip.org/
) or your OS built-inAbility to upload files via FTP: can use ftp command-line, or can use GUI like Cyberduck (
https://cyberduck.io/
) or another (
https://en.wikipedia.org/wiki/Comparison_of_FTP_client_software
)
We will be using a Galaxy Instance available at:
http://gcc2016.dblankenberg.org/
It would be helpful as well if you download this file in advance:
http://gcc2016.dblankenberg.org/static/example/MiSeqSOPData.zip
alternate link:
http://www.mothur.org/w/images/d/d6/MiSeqSOPData.zip
Slides are available here:
http://dblankenberg.org/gcc2016/training/metagenomics/blankenberg_gcc_2016_training_metagenomics.pdf
Prerequisites:
A general knowledge of Galaxy (for example, you should be familiar with the material in
Galaxy 101
or have attended
Introduction to Galaxy
).
A wi-fi enabled laptop with a modern web browser. Google Chrome, Firefox and Safari will work best.
Instructors
Dan Blankenberg
Assistant Professor, Genomic Medicine Institute, Cleveland Clinic Lerner Research Institute
Sunday June 26, 2016 9:00am - 11:30am EDT
IMU Maple Room
D.1 Training - Using
D.x Training - All
Attendees (9)
s
A
J
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