Name: Metagenomics with Galaxy
Start: 2016-06-26T09:00:00-0400
End: 2016-06-26T11:30:00-0400

Visit the main conference website: http://galaxyproject.org/gcc2016

Back To Schedule

Metagenomics with Galaxy

➔ Video

Tools and workflows for the analysis and visualisation of metagenomics data sets.

Software & Downloads:

Ability to unzip files: can unzip on command-line; or use a GUI, like 7Zip (http://www.7-zip.org/) or your OS built-inAbility to upload files via FTP: can use ftp command-line, or can use GUI like Cyberduck (https://cyberduck.io/) or another (https://en.wikipedia.org/wiki/Comparison_of_FTP_client_software)
We will be using a Galaxy Instance available at: http://gcc2016.dblankenberg.org/
It would be helpful as well if you download this file in advance: http://gcc2016.dblankenberg.org/static/example/MiSeqSOPData.zip alternate link: http://www.mothur.org/w/images/d/d6/MiSeqSOPData.zip
Slides are available here: http://dblankenberg.org/gcc2016/training/metagenomics/blankenberg_gcc_2016_training_metagenomics.pdf

Prerequisites:

A general knowledge of Galaxy (for example, you should be familiar with the material in Galaxy 101 or have attended Introduction to Galaxy).

A wi-fi enabled laptop with a modern web browser. Google Chrome, Firefox and Safari will work best.

Instructors

Dan Blankenberg

Assistant Professor, Genomic Medicine Institute, Cleveland Clinic Lerner Research Institute

Sunday June 26, 2016 9:00am - 11:30am EDT
IMU Maple Room

D.1 Training - Using D.x Training - All

Galaxy Community Conference 2016 (GCC16)

Dan Blankenberg

Attendees (9)

Galaxy Community Conference 2016 (GCC16)

Sign up or log in to save this to your schedule, view media, leave feedback and see who's attending!

Dan Blankenberg

Attendees (9)